Marine Microbial Eukaryote Transcriptome Sequencing Project
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Symbiodinium sp. CCMP2430
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| Principle Investigator(s) | William Wilson |
|---|---|
| External sample ID | CCMP2430 +UV mid-crash |
| NCGR Sample ID | MMETSP1117 |
| Sample accession number | CAM_SMPL_002615 |
| Assembly accession number | CAM_ASM_000433 |
| Combined Assembly Name | Symbiodinium-sp-CCMP2430 |
| Genus | Symbiodinium |
| Species | sp. |
| Strain | CCMP2430 |
| Clonal | No |
| Axenic | No |
| Prelim. NCBI Taxon ID | 631057 |
| 18S rRNA | |
| Importance of organism and transcriptomes | |
| Additional citations and references | |
| Environmental Data | |
| Latitude | -23.5 |
| Longitude | 152 |
| Collection date | 01-AUG-00 |
| Sample collection site | Pacific_Ocean |
| Habitat | marine habitat |
| Country | AUSTRALIA |
| Experimental Data | |
| Date of experiment | 01-OCT-11 |
| Growth medium | f/2 amended seawater |
| Modifications to growth medium | f/2 for all nutrients, no Na2SiO3 added |
| Temperature (ºC) | 25 |
| Salinty (psu) | 34 |
| pH | 8.1 |
| Light (µmol photons / m2 / sec) | 200 |
| Day portion of day:night cycle in hours | 12 |
| Night portion of day:night cycle in hours | 12 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36.2 |
| Trace elements (total) (nmol/L) | 12794 |
| Investigation type | Eukaryotes |
| Other experimental metadata available | 1 L of exponentially-growing culture will be exposed to UV light (254 nm) for 2 minutes then returned to normal growth conditions. RNA will be harvested mid-way through UV-induced population crash. |