Home :: List of Publicly Available Datasets :: Symbiodinium sp. CCMP2430

Symbiodinium sp. CCMP2430

Downloads:


Principle Investigator(s) William Wilson
External sample IDCCMP2430 +UV mid-crash
NCGR Sample IDMMETSP1117
Sample accession numberCAM_SMPL_002615
Assembly accession numberCAM_ASM_000433
Combined Assembly NameSymbiodinium-sp-CCMP2430
GenusSymbiodinium
Speciessp.
StrainCCMP2430
ClonalNo
AxenicNo
Prelim. NCBI Taxon ID631057
18S rRNA
Importance of organism and transcriptomes
Additional citations and references
Environmental Data
Latitude-23.5
Longitude152
Collection date01-AUG-00
Sample collection sitePacific_Ocean
Habitatmarine habitat
CountryAUSTRALIA
Experimental Data
Date of experiment01-OCT-11
Growth mediumf/2 amended seawater
Modifications to growth mediumf/2 for all nutrients, no Na2SiO3 added
Temperature (ºC)25
Salinty (psu)34
pH8.1
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours12
Night portion of day:night cycle in hours12
Nitrate (μmol/L)882
Phosphate (μmol/L)36.2
Trace elements (total) (nmol/L)12794
Investigation typeEukaryotes
Other experimental metadata available1 L of exponentially-growing culture will be exposed to UV light (254 nm) for 2 minutes then returned to normal growth conditions. RNA will be harvested mid-way through UV-induced population crash.