Marine Microbial Eukaryote Transcriptome Sequencing Project
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Isochrysis sp. CCMP1324
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| Principle Investigator(s) | Sheri Floge |
|---|---|
| External sample ID | CCMP 1324 +UV 24h |
| NCGR Sample ID | MMETSP1131 |
| Sample accession number | CAM_SMPL_002652 |
| Assembly accession number | CAM_ASM_000470 |
| Combined Assembly Name | Isochrysis-sp-CCMP1324 |
| Genus | Isochrysis |
| Species | sp. |
| Strain | CCMP1324 |
| Clonal | Yes |
| Axenic | Yes |
| Prelim. NCBI Taxon ID | 40639 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Isochrysis is an oil-rich algae of interest to biofuels research as well as an important feedstock in the bivalve aquaculture industry. This strain harbors a putative persitent virus. |
| Additional citations and references | |
| Environmental Data | |
| Experimental Data | |
| Date of experiment | 01-DEC-11 |
| Growth medium | f/2 amended seawater |
| Modifications to growth medium | f/2 nutrients, no silica |
| Temperature (ºC) | 16 |
| Salinty (psu) | 34 |
| pH | 8.1 |
| Light (µmol photons / m2 / sec) | 200 |
| Day portion of day:night cycle in hours | 16 |
| Night portion of day:night cycle in hours | 8 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36.2 |
| Trace elements (total) (nmol/L) | 12794 |
| Investigation type | Eukaryotes |
| Other experimental metadata available | Sample following 2min of UV-C (254nm) irradiation mid-way through cell population decline at approximately 24hours post-irradiation. |