Marine Microbial Eukaryote Transcriptome Sequencing Project
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non described non described CCMP2298
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| Principle Investigator(s) | Connie Lovejoy |
|---|---|
| External sample ID | ArcticChryso low salt |
| NCGR Sample ID | MMETSP1143 |
| Sample accession number | CAM_SMPL_002906 |
| Assembly accession number | CAM_ASM_000724 |
| Combined Assembly Name | Undescribed-undescribed-CCMP2298 |
| Genus | non described |
| Species | non described |
| Strain | CCMP2298 |
| Clonal | No |
| Axenic | Yes |
| Prelim. NCBI Taxon ID | 483371 |
| 18S rRNA | |
| Importance of organism and transcriptomes | This strain represents a cold ecotype of small chrysophyte. As this genus is both phototrophic and phagotrophic transcriptomic data will provide information on the potential of mixotrophs in a changing Arctic Ocean. |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 77.0014 |
| Longitude | -77.2383 |
| Collection date | 15-JUN-98 |
| Sample collection site | Baffin Bay |
| Other collection site info | North Water Polynia Study (NOW) |
| Sample material (e.g. "seawater," "sediment," etc.) | broken fast ice |
| ENVO term for habitat - primary term | Acquatic: marine |
| ENVO term for habitat - secondary term | Other |
| Habitat | marine habitat |
| Country | CANADA |
| Experimental Data | |
| Date of experiment | 31-AUG-11 |
| Growth medium | K amended sea water |
| Modifications to growth medium | antibiotics final concentrations: penicilin: 25mg/L; neomycin 20mg/L; kanamycin 20mg/L; salinity corrected with miliQ water |
| Temperature (ºC) | 6 |
| Salinty (psu) | 18 |
| pH | 7.5 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 24 |
| Nitrate (μmol/L) | 882 |
| Ammonium (μmol/L) | 50 |
| Phosphate (μmol/L) | 10 |
| Silicate (μmol/L) | 504 |
| Total Fe (nmol/L) | 11700 |
| Trace elements (total) (nmol/L) | 123766 |
| Pressure (atm) | 1 |
| Investigation type | Eukaryotes |