Marine Microbial Eukaryote Transcriptome Sequencing Project
Home :: List of Publicly Available Datasets :: Phaeocystis Sp CCMP2710
Phaeocystis Sp CCMP2710
Downloads:
| Principle Investigator(s) | Willie Wilson |
|---|---|
| External sample ID | CCMP2710 |
| NCGR Sample ID | MMETSP1162 |
| Sample accession number | CAM_SMPL_002956 |
| Assembly accession number | CAM_ASM_000774 |
| Combined Assembly Name | N/A |
| Genus | Phaeocystis |
| Species | Sp |
| Strain | CCMP2710 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 33656 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Strain chosen from NCMA (formerly CCMP) to increase the taxonomic range |
| Additional citations and references | |
| Environmental Data | |
| Latitude | 23.5643 |
| Longitude | 58.853 |
| Sample collection site | Arabian Sea |
| Other collection site info | 23.5643N 58.8530E Gulf of Oman, Arabian Sea, Station OM-3 |
| Habitat | marine habitat |
| Experimental Data | |
| Date of experiment | 15-FEB-12 |
| Growth medium | L1 |
| Modifications to growth medium | added 200 ul of 500 mol NH4Cl per liter |
| Temperature (ºC) | 20 |
| Salinty (psu) | 32 |
| pH | 8 |
| Day portion of day:night cycle in hours | 13 |
| Night portion of day:night cycle in hours | 11 |
| Nitrate (μmol/L) | 882 |
| Ammonium (μmol/L) | 100 |
| Phosphate (μmol/L) | 36.2 |
| Silicate (μmol/L) | 106 |
| Trace elements (total) (nmol/L) | 12871.2 |