Fabrea Fabrea salina Unknown

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Environmental Data
Principle Investigator(s)	Giulio Petroni
External sample ID
NCGR Sample ID	MMETSP1345
Sample accession number	CAM_SMPL_003125
Assembly accession number	CAM_ASM_000843
Combined Assembly Name	N/A
Genus	Fabrea
Species	Fabrea salina
Strain	Unknown
Clonal	No
Axenic	No
Prelim. NCBI Taxon ID	342563
18S rRNA	tagtcaTATGCTTGTCTCAAAGACTAAGCCATGCATGTCTAAGTATAAGCTTGTATACGG TGAGACTGCGAATGGCTCATTAAAACAGTTATAGTTTATTTGCTAAGCGTTTATATGGAT AACCGTAGTAATTCTAGAGCTAATACATGCTGGTTACGCAGTGCGTAGTATTTATTAGAT AAAACCCAACGGGGGCAACCCTGTGGAGGAATCATAATAACTTGGCGGACCTCTTGGAGG TGAAGCATTCAAGTTTCTGCCCTATCAGCTTTCGATGGTAGTGTATTGGACTACCATGGC GATGACGGGTGACGGGGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTAC CACATCTAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTAACTCAGGGAGGTAGTGA CAAGAAATAACAACGCGGGGCTTAGTCTCGCGATTGGAATGAGTTAAGTGTAAAAGCCTT TTCGAGGACCCaCTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAGTAG CGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGAAGTCTGTGCGGGAAAAGGA ATGGCTcTGCCGTGCCTGGTCCTGCACATCCGTCAGAACAGACTCAGTGGCATTGAGTTG TCGCTGTGTTGATCTGGCACTTTACCTTGAGCAAATTAGAGTGTTCCAGGCAGGCCAGCG CCTGAATAGTCCAGCATGGAATAATAGAATAGGACTGAGCTCCATTTATTGGTGTTATGG CGCTCGGTAATGATTAATAGGGATAGTTGGGGGCATTCGTATTTAATTGTCAGAGGTGAA ATTCTATGATTTATTAAAGACGAACCTATGCGAAAGCATTTGCCAAGGATGTTTTCATT AATCAAGAAcGAAAGTTAAGGGATCAAAGACGATCAGATaCCGTcGTAGTCTTAACCATA AACTATGCCGACTAGAGATTGGAGGGGCAACACCAGTACTCCTTCAGGATCTTCCGAGAA ATCAAAGTCTTTGGGTTCTGGGGGGAGTATGGTCGCAAGACTGAAACTTAAAGGAATTGA CGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTT ACCAGGTCCAGACATGGGAAGGATTGACAGATTGAGAGCTCTTTCTTGATTCTATGGGTG GTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGATAACGAAC GAGACCTTAACCTACTAACTAGTTGGAACTCGCAGGAGTTCTGAACTTCTTAGAGGGACT TTGGGGGCTACTCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTCC TGGGCCGCACGCGCGCTACACTGATGCAGGCAACAAGTTCCTGGGCAGACATGCCTGGGC AATCTGCAACCTGCATCGTGATGGGGATTGACCCTTGTAATTCTTGGTCATCAACGAGGA ATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATTACGTCCCTGCCCTTTGTACACAC CGCCCGTCGCTCCTACCGATTTCGAGTGGTGAGGTGAACTCTTCGGACTGCTTGCGAGTG GAAAGTCGAGTGAACCTTATCACTTAGAGGAAGGAGAAGTCGTAACAAGGTATCTGTAG
Importance of organism and transcriptomes
Additional citations and references	Lynn, D.H. 2008. The Ciliated Protozoa: Characterization, Classification, and Guide to the Literature. Springer, Dordrecht. 605 p.
Primary citation for organism's characterization, if available	In Vivo NMR Metabolic Profiling of Fabrea salina Reveals Sequential Defense Mechanisms against Ultraviolet Radiation. 2011. Marangoni, R; Paris, D; Melck, D; Fulgentini, L; Colombetti, G; Motta, A BIOPHYSICAL JOURNAL Volume: 100 Issue: 1 Pages: 215-224
Sample collection site	Saline di Torre Colimena (Taranto)
Sample material (e.g. "seawater," "sediment," etc.)	Seawater and sediment
ENVO term for habitat - primary term	Acquatic: marine
Habitat	marine habitat
Country	ITALY
Experimental Data
Date of experiment	15-DEC-12
Growth medium	autoclaved artificial seawater (Red Sea Salt, Red Sea, http://www.redseafish.com)
Temperature (ºC)	19
Salinty (psu)	33
Light (µmol photons / m2 / sec)	300
Day portion of day:night cycle in hours	12
Night portion of day:night cycle in hours	12
Prey organism, if applicable (genus and species)	bacteria
Investigation type	Eukaryotes
Other experimental metadata available	Cells treated with 0.1 mg/ml ampicillin overnigth and then washed in autoclaved seawater