Marine Microbial Eukaryote Transcriptome Sequencing Project
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Symbiodinium sp. D1a
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| Principle Investigator(s) | Ruth Gates |
|---|---|
| External sample ID | Gates_SymD1a_2 |
| NCGR Sample ID | MMETSP1377 |
| Sample accession number | CAM_SMPL_003156 |
| Assembly accession number | CAM_ASM_000874 |
| Combined Assembly Name | N/A |
| Genus | Symbiodinium |
| Species | sp. |
| Strain | D1a |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 462645 |
| 18S rRNA | |
| Importance of organism and transcriptomes | |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | LaJeunesse TC, Lambert G, Andersen RA, Coffroth MA, Galbraith DW (2005) Symbiodinium (Pyrrhophyta) genome sizes (DNA content) are smallest among dinoflagellates. J Phycol 41:880-886. |
| Latitude | 24.7335 |
| Longitude | -80.769167 |
| Collection date | 08-JUN-05 |
| Sample collection site | Atlantic_Ocean |
| Other collection site info | Tennessee Reef |
| Sample material (e.g. "seawater," "sediment," etc.) | Montastraea faveolata |
| ENVO term for habitat - primary term | Organism-Associated |
| Habitat description | in hospite |
| Habitat | organism-associated habitat |
| Country | UNITED STATES |
| Experimental Data | |
| Date of experiment | 22-JUL-11 |
| Growth medium | L1 |
| Modifications to growth medium | L1 silica omitted |
| Temperature (ºC) | 26 |
| Salinty (psu) | 35 |
| pH | 8.3 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36 |
| Trace elements (total) (nmol/L) | 25168 |
| Investigation type | Eukaryotes |