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Pavlova sp. CCMP459

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Principle Investigator(s) Sheri Floge
External sample IDCCMP 459 +UV 23h
NCGR Sample IDMMETSP1381
Sample accession numberCAM_SMPL_003160
Assembly accession numberCAM_ASM_000878
Combined Assembly NamePavlova-sp-CCMP459
GenusPavlova
Speciessp.
StrainCCMP459
ClonalYes
AxenicYes
Prelim. NCBI Taxon ID298111
18S rRNA
Importance of organism and transcriptomesPavlova is an oil-rich algae of interest to biofuels research and the aquaculture industry; this strain harbors a putative persistent virus.
Additional citations and references
Environmental Data
Experimental Data
Date of experiment27-NOV-12
Growth mediumf/2 amended seawater
Modifications to growth mediumf/2 nutrients, no silica
Temperature (ºC)16
Salinty (psu)34
pH8.1
Light (µmol photons / m2 / sec)200
Day portion of day:night cycle in hours16
Night portion of day:night cycle in hours8
Nitrate (μmol/L)882
Phosphate (μmol/L)36.2
Trace elements (total) (nmol/L)12794
Investigation typeEukaryotes
Other experimental metadata availableSample following 2min of UV-C (254nm) irradiation preceding cell population decline at approximately 12hours post-irradiation.