Marine Microbial Eukaryote Transcriptome Sequencing Project
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Bathycoccus prasinos CCMP1898
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| Principle Investigator(s) | Alexandra Z. Worden |
|---|---|
| External sample ID | CCMP1898 |
| NCGR Sample ID | MMETSP1399 |
| Sample accession number | CAM_SMPL_003175 |
| Assembly accession number | CAM_ASM_000893 |
| Combined Assembly Name | N/A |
| Genus | Bathycoccus |
| Species | prasinos |
| Strain | CCMP1898 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 41875 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Bathycoccus prasinos is an extremely small cosmopolitan marine green algae, member of the Mamiellophyceae class that dominated the small photosynthetic eukaryote community in temperate coastal waters. This transcriptome is obtained under light-dark growth conditions. |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | http://dx.doi.org/10.2216/i0031-8884-29-3-344.1 |
| Collection date | 17-APR-86 |
| Sample collection site | Mediterranean Sea |
| Other collection site info | Gulf of Naples |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Aquatic: marine |
| Habitat | marine habitat |
| Country | ITALY |
| Experimental Data | |
| Date of experiment | 21-DEC-12 |
| Growth medium | L1-Si amended natural seawater (Eastern Pacific) |
| Modifications to growth medium | L1 for all nutrients except omitted silicate |
| Temperature (ºC) | 23 |
| Salinty (psu) | 36 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 80 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36 |
| Trace elements (total) (nmol/L) | 12780 |
| Investigation type | Eukaryotes |