Marine Microbial Eukaryote Transcriptome Sequencing Project
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Micromonas pusilla CCMP1723
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| Principle Investigator(s) | Alexandra Z. Worden |
|---|---|
| External sample ID | CCMP1723 |
| NCGR Sample ID | MMETSP1403 |
| Sample accession number | CAM_SMPL_003075 |
| Assembly accession number | CAM_ASM_000794 |
| Combined Assembly Name | N/A |
| Genus | Micromonas |
| Species | pusilla |
| Strain | CCMP1723 |
| Clonal | No |
| Axenic | No |
| Prelim. NCBI Taxon ID | 38833 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Micromonas sp. is a prominent member of the picoplankton community in marine waters. This transcriptome is obtained under light-dark growth conditions. |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | PMID:16120798 |
| Collection date | 27-JUN-90 |
| Sample collection site | open Mediterranean Sea |
| Other collection site info | Sicily Channel |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | Aquatic: marine |
| ENVO term for habitat - secondary term | -select- |
| Habitat | marine habitat |
| Experimental Data | |
| Growth medium | L1-Si amended natural seawater (Eastern Pacific) |
| Modifications to growth medium | L1 for all nutrients except omitted silicate |
| Temperature (ºC) | 21 |
| Salinty (psu) | 35 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 80 |
| Day portion of day:night cycle in hours | 14 |
| Night portion of day:night cycle in hours | 10 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36 |
| Trace elements (total) (nmol/L) | 12780 |
| Prey organism, if applicable (genus and species) | n/a |
| Investigation type | Eukaryotes |