Home :: List of Publicly Available Datasets :: Oxyrrhis marina LB1974

Oxyrrhis marina LB1974

Downloads:


Principle Investigator(s) Matthew Johnson
External sample IDOxy-PtNOA
NCGR Sample IDMMETSP1426
Sample accession numberCAM_SMPL_003197
Assembly accession numberCAM_ASM_000915
Combined Assembly NameOxyrrhis-marina-LB1974
GenusOxyrrhis
Speciesmarina
StrainLB1974
ClonalNo
AxenicNo
Prelim. NCBI Taxon ID2969
18S rRNA
Importance of organism and transcriptomesOxyrrhis marina is a model estuarine and coastal marine heterotrophic dinoflagellate that is easy to culture and used in many labs. This transcriptome will allow us to identify O. marina genes that are involved in predator prey interactions and heterotrophic metabolism.
Additional citations and references
Environmental Data
Primary citation for organism's characterization, if availableDujardin, F. (1841). Histoire naturelle des Zoophytes, Infusoires, comprenant la physiologie et la clasification de ces animaux et la maniere de les etudier a l'aide du microscope. pp. i-xii, 1-684. Paris: Librarie Encyclopedique de Roret.
Collection date01-MAY-66
Sample collection sitePacific_Ocean
Other collection site infoLa Jolla, CA, net tow from SOI pier, by R.A. Lewin
Sample material (e.g. "seawater," "sediment," etc.)seawater
ENVO term for habitat - primary termAcquatic: marine
Habitatmarine habitat
CountryUNITED STATES
Experimental Data
Date of experiment24-OCT-11
Growth mediumSterile coastal sea-water
Temperature (ºC)18
Salinty (psu)34
pH8.3
Light (µmol photons / m2 / sec)20
Day portion of day:night cycle in hours14
Night portion of day:night cycle in hours10
Prey organism, if applicable (genus and species)Phaeodactylum tricornutum
Investigation typeEukaryotes