Marine Microbial Eukaryote Transcriptome Sequencing Project
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Skeletonema marinoi UNC1201
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| Principle Investigator(s) | Adrian Marchetti |
|---|---|
| External sample ID | S. marinoi |
| NCGR Sample ID | MMETSP1428 |
| Sample accession number | CAM_SMPL_003077 |
| Assembly accession number | CAM_ASM_000796 |
| Combined Assembly Name | N/A |
| Genus | Skeletonema |
| Species | marinoi |
| Strain | UNC1201 |
| Clonal | Unknown |
| Axenic | No |
| Prelim. NCBI Taxon ID | 267567 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Isolated during the GeoMICS cruise conducted in May 2012 |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Hasle, G.R. (1965). Nitzschia and Fragilariopsis species studied in the light and electron microscopes. III. The genus Fragilariopsis. Skrifter Utgitt av Det Norske Videnskaps-Akademi i Oslo I. Mat.-Naturv. Klasse Ny Serie, 21:1-49. |
| Latitude | 48.816 |
| Longitude | -128.666 |
| Sample material (e.g. "seawater," "sediment," etc.) | seawater |
| ENVO term for habitat - primary term | -select- |
| ENVO term for habitat - secondary term | -select- |
| Habitat description | temperate open ocean mixed layer |
| Habitat | marine habitat |
| Experimental Data | |
| Date of experiment | 31-JAN-09 |
| Growth medium | Aquil |
| Modifications to growth medium | Standard Aquil with 100 uM EDTA |
| Temperature (ºC) | 12 |
| Salinty (psu) | 32 |
| pH | 8.1 |
| Light (µmol photons / m2 / sec) | 120 |
| Day portion of day:night cycle in hours | 24 |
| Nitrate (μmol/L) | 300 |
| Phosphate (μmol/L) | 20 |
| Silicate (μmol/L) | 200 |
| Total Fe (nmol/L) | 1370 |
| Trace elements (total) (nmol/L) | 1750 |
| Prey organism, if applicable (genus and species) | N/A |
| Investigation type | Eukaryotes |