Madagascaria erythrocladiodes CCMP3234

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Environmental Data
Principle Investigator(s)	Mike Preston
External sample ID
NCGR Sample ID	MMETSP1450
Sample accession number	CAM_SMPL_003304
Assembly accession number	CAM_ASM_001115
Combined Assembly Name	N/A
Genus	Madagascaria
Species	erythrocladiodes
Strain	CCMP3234
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	753684
18S rRNA	TGCGAATGGCTCATTAAAACAGTTATAATTTATTTGATGGTACCTCTTACTTGGATAACCGTAGTAATTCTAGAGCTAATACATGCCTACACGCCCGACTCACGAAGGGTGGCATTTACTGGACTCAAAACCTTCCCTTCGGGTGAATGGTGAATCACGGTAACTTTTGGATCGCACGGCTTGTCCGGCGACAGATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGGTAGTGGCCTACCATGGTGTTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACAGGGAGGTAGTGACAATAAATAACAATGGGGAGCCCTTTCGGGTTACCCACTTGGAATGAGTACAATTTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTCGGACCTCGGGCGCGGCGCACGACTCGGCCACTGGTCGTGCTTGTGCGGCGCGCCTTCCTTCCAGCGAGCGCGTGGGTCCTTTGTTGGTTCTGCGCGTGAGTTGGGATGTTTACTGTGAACAAATTAGAGTGTTCAAAGCAGGCCTTTGCTGTGAATACATTAGCATGGAATAATAGAATAGGACTTTGGTTCTGTTTTGTTGGTTTCTGGGACCGAAGTAATGATTAATAGGGATAGTTGGGGGCACTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTAGGGGATCGAAGACGATTAGATACCGTCGTAGTCTTAACCATAAACTATGCCGACTGGGGATCAGCAGATGTCATCCGGACTCTGTTGGCACCCTATGAGAAATCAAAGTTCTTGGGTTCTGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCATCACCGGGAGTGGAGCTTGCGGCTTAATTTGACTCAACACGGGAAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGATTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTTAACCTGCTAAATAGCTACGCCAATCCTGCATTGGCGGGCAGCTTCTTAGAGGGACTATCCGTGACTAACGGATGGAGGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGATGCATTCAGCGAGTCTCCCTTGGCCGGAAGGTCTGGGTAATCTCTCAAACTGCATCGTGCTGGGGATAGATTATTGCAATTATTAATCTTCAACGAGGAATTCCTTGTAAGCGTGAGTCATCAGCTCGCGTTGAATACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAAATGTCCGGACTGCGGCGAAGGCTTCGGGTCACCGTCGCCTCGCTGCGGAAA
Importance of organism and transcriptomes	Geographically interesting red alga.
Additional citations and references
Primary citation for organism's characterization, if available	Zuccarello, G.C., Kikuchi, N. & West, J.A. (2010). Molecular phylogeny of the crustose Erythropeltidales (Compsopogonophyceae, Rhodophyta): new genera Pseudoerythrocladia and Madagascaria and the evolution of the upright habit. Journal of Phycology 46(2): 363-373.
Latitude	-13.3836
Longitude	48.3388
Depth (m)	10
Salinity (psu)	30
Temperature (ºC)	20
pH	7.9
Collection date	27-MAY-04
Sample collection site	Indian_Ocean
Sample material (e.g. "seawater," "sediment," etc.)	Seawater
ENVO term for habitat - primary term	Acquatic: marine
Other environmental metadata available	On Geldium
Other environmental metadata available	On Geldium
Habitat	marine habitat
Country	MADAGASCAR
Experimental Data
Date of experiment	25-AUG-13
Growth medium	L1 amended seawater
Temperature (ºC)	20
Salinty (psu)	33
pH	8.2
Light (µmol photons / m2 / sec)	100
Day portion of day:night cycle in hours	13
Night portion of day:night cycle in hours	11
Nitrate (μmol/L)	882
Phosphate (μmol/L)	36.2
Silicate (μmol/L)	106
Total Fe (nmol/L)	11.7
Trace elements (total) (nmol/L)	12871.2
CO2 (ppm)	390
Pressure (atm)	1
Investigation type	Eukaryotes