Pavlova lutheri RCC1537

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Environmental Data
Principle Investigator(s)	Mike Preston
External sample ID
NCGR Sample ID	MMETSP1463
Sample accession number	CAM_SMPL_003312
Assembly accession number	CAM_ASM_001123
Combined Assembly Name	N/A
Genus	Pavlova
Species	lutheri
Strain	RCC1537
Clonal	Yes
Axenic	No
Prelim. NCBI Taxon ID	2832
18S rRNA	GCGAATGGCTCATTAAATCAGTTATGGTTTATTTGATGGTACCTTACTACTTGGATACCCGTAGTAATTCTAGAGCTAATACATGCAGGCAGTCCCGACGTTTGGAGGGATGTATTTATTAGATAAGGAACCAACCCGGGCGCAAGCCCGGTTGCGTGCTGAGTCATACTAACTGTTCGAATCGCATGGCATCTCGCCGGCGATGGTTCATTCAAATTTCTGCCCTATCAGCTTTCGATGGTAGGATAGAGGCCTACCATGGCGTTAACGGGTAACGGGGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACAGGGAGGTAGTGACAAGAAATAACAATACAGGGCTCTTCGAGTCTTGTAATTGGAATGAGTACAATTTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTCGGATTTCGGGCTGGTCGTGCGGGTCTGCCGTTGGGTATGTACTTGCGTCGTCCGGTCAGTATGGCGTAGGTGCGTCGCCTCGTTGATTCGTGTGCGTCGTTCTCTGCGCCCGTTTACTTTGAGAAAATCAGAGTGTTCAAAGCAGGCCTTTGCCATTGTATGTGTTAGCATGGGATAATGGAATAGGACCTTGGTGCTATTTTGTTGGTTTCGAACGCCGAGGTAATGATGAATAGGGACAGTCAGGGGCACTCGTATTCCGTAGAGAGAGGTGAAATTCTTAGACCCACGGAAGACGCACTACTGCGAAAGCATTTGCCAGGGATGTTTTCACTGATCAAGAACGAAAGTTAGGGGATCGAAGATGATCAGATACCGTCGTAGTCTTAACCATAAACCATGCCGACCAGGGATTGGTGGTTGTCATCTTTGACATCATCAGCACCTTTCGAGAAATCAGAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGCGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATTGTGAGGATTGACAGATTGAGAGCTCTTTCTTGATTCAATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTTACCCTGCTAAATAGTCCTCGTAACCACTGCGTTGCGTGCTTGGCTTCTTAGAGGGACTATCGGTATCCAACCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGCATTCATCGAGTCGTACCTGCATCGAAAGGTGTGGGCAATCTGTTGAACCTGCGTCGTGATGGGGATAGATTATTGCAATTCTTAATCTTCAACGAGGAATGCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAGGTTTTCGGACTGGCGCAGTGCCGAGGTTCGCCTTGGTGCTGCGCCGGGAA
Importance of organism and transcriptomes	Representative of lineage within Pavlovo; aquaculture species
Additional citations and references	El Mahdi Bendifa, Ian Probert, Annie Hervec, Chantal Billard, Didier Goux, Christophe Lelong, Jean-Paul Cadoret, and Benoit Veron. Integrative Taxonomy of the Pavlovophyceae (Haptophyta): A Reassessment. Protist, Vol. 162, 738?761, 2011.
Primary citation for organism's characterization, if available	Droop, M.R. 1953. On the ecology of flagellates from some brackish and freshwater rock pools of Finland. Acta Bot. Fenn. 51:1-52
Latitude	55.743
Longitude	4.92334
Salinity (psu)	30
Temperature (ºC)	14
pH	7.9
Collection date	01-JAN-53
Sample collection site	North Sea
Other collection site info	Isle of Cumbrae, Scotland, rock pool
Sample material (e.g. "seawater," "sediment," etc.)	beach sand
ENVO term for habitat - primary term	Acquatic: marine
Habitat	soil
Country	UNITED KINGDOM
Experimental Data
Date of experiment	25-AUG-13
Growth medium	L1 amended seawater
Temperature (ºC)	24
Salinty (psu)	33
pH	8.2
Light (µmol photons / m2 / sec)	100
Day portion of day:night cycle in hours	13
Night portion of day:night cycle in hours	11
Nitrate (μmol/L)	882
Phosphate (μmol/L)	36.2
Silicate (μmol/L)	106
Total Fe (nmol/L)	11.7
Trace elements (total) (nmol/L)	12871.2
CO2 (ppm)	390
Pressure (atm)	1
Investigation type	Eukaryotes