Marine Microbial Eukaryote Transcriptome Sequencing Project
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Pavlova gyrans CCMP608
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| Principle Investigator(s) | Mike Preston |
|---|---|
| External sample ID | |
| NCGR Sample ID | MMETSP1466 |
| Sample accession number | CAM_SMPL_003315 |
| Assembly accession number | CAM_ASM_001126 |
| Combined Assembly Name | N/A |
| Genus | Pavlova |
| Species | gyrans |
| Strain | CCMP608 |
| Clonal | Yes |
| Axenic | Yes |
| Prelim. NCBI Taxon ID | 44452 |
| 18S rRNA | |
| Importance of organism and transcriptomes | Representative of lineage within Pavlovo |
| Additional citations and references | |
| Environmental Data | |
| Primary citation for organism's characterization, if available | Butcher, R.W. (1952). Contributions to knowledge of the smaller marine algae. Journal of the Marine Biological Association of the United Kingdom 31: 175-191. |
| Depth (m) | 10 |
| Salinity (psu) | 30 |
| Temperature (ºC) | 14 |
| pH | 7.9 |
| Sample collection site | Atlantic_Ocean |
| Other collection site info | Helford river, Falmouth, UK |
| Sample material (e.g. "seawater," "sediment," etc.) | Seawater |
| ENVO term for habitat - primary term | Acquatic: marine |
| Habitat | marine habitat |
| Country | UNITED KINGDOM |
| Experimental Data | |
| Date of experiment | 25-AUG-13 |
| Growth medium | L1 amended seawater |
| Temperature (ºC) | 14 |
| Salinty (psu) | 33 |
| pH | 8.2 |
| Light (µmol photons / m2 / sec) | 100 |
| Day portion of day:night cycle in hours | 13 |
| Night portion of day:night cycle in hours | 11 |
| Nitrate (μmol/L) | 882 |
| Phosphate (μmol/L) | 36.2 |
| Silicate (μmol/L) | 106 |
| Total Fe (nmol/L) | 11.7 |
| Trace elements (total) (nmol/L) | 12871.2 |
| CO2 (ppm) | 390 |
| Pressure (atm) | 1 |
| Investigation type | Eukaryotes |